Package | hl7.fhir.uv.genomics-reporting |
Type | CodeSystem |
Id | Id |
FHIR Version | R4 |
Source | http://hl7.org/fhir/uv/genomics-reporting/https://build.fhir.org/ig/HL7/genomics-reporting/CodeSystem-clinvar-evidence-level-custom-cs.html |
Url | http://hl7.org/fhir/uv/genomics-reporting/CodeSystem/clinvar-evidence-level-custom-cs |
Version | 3.0.1-SNAPSHOT |
Status | active |
Date | 2024-10-29T16:58:35+00:00 |
Name | ClinVarEvidenceLevelCustomCS |
Title | ClinVar Evidence Level Example Codes |
Experimental | True |
Realm | uv |
Authority | hl7 |
Description | ClinVar contains examples of evidence level concepts that are not conflated with clinical significance. These can be found on ClinVar https://www.ncbi.nlm.nih.gov/clinvar/docs/review_status/ . These examples are informational only, for copyright information contact the relevant source. |
Content | complete |
ValueSet | |
evidence-level-example-vs | Evidence Level Examples |
No resources found
Note: links and images are rebased to the (stated) source
Generated Narrative: CodeSystem clinvar-evidence-level-custom-cs
This case-sensitive code system http://hl7.org/fhir/uv/genomics-reporting/CodeSystem/clinvar-evidence-level-custom-cs
defines the following codes:
{
"resourceType" : "CodeSystem",
"id" : "clinvar-evidence-level-custom-cs",
"text" : {
"status" : "generated",
"div" : "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p class=\"res-header-id\"><b>Generated Narrative: CodeSystem clinvar-evidence-level-custom-cs</b></p><a name=\"clinvar-evidence-level-custom-cs\"> </a><a name=\"hcclinvar-evidence-level-custom-cs\"> </a><a name=\"clinvar-evidence-level-custom-cs-en-US\"> </a><p>This case-sensitive code system <code>http://hl7.org/fhir/uv/genomics-reporting/CodeSystem/clinvar-evidence-level-custom-cs</code> defines the following codes:</p><table class=\"codes\"><tr><td style=\"white-space:nowrap\"><b>Code</b></td><td><b>Display</b></td><td><b>Definition</b></td></tr><tr><td style=\"white-space:nowrap\">4-star<a name=\"clinvar-evidence-level-custom-cs-4-star\"> </a></td><td>4 star</td><td>Supported by practice guideline</td></tr><tr><td style=\"white-space:nowrap\">3-star<a name=\"clinvar-evidence-level-custom-cs-3-star\"> </a></td><td>3 star</td><td>Supported by expert panel review</td></tr><tr><td style=\"white-space:nowrap\">2-star<a name=\"clinvar-evidence-level-custom-cs-2-star\"> </a></td><td>2 star</td><td>Supported by submission by multiple-submitters with documentation of criteria for assertion</td></tr><tr><td style=\"white-space:nowrap\">1-star<a name=\"clinvar-evidence-level-custom-cs-1-star\"> </a></td><td>1 star</td><td>Single submitter providing interpretation and documentation of criteria for assertion</td></tr><tr><td style=\"white-space:nowrap\">no-star<a name=\"clinvar-evidence-level-custom-cs-no-star\"> </a></td><td>no star</td><td>submitted, no evidence</td></tr></table></div>"
},
"extension" : [
{
"url" : "http://hl7.org/fhir/StructureDefinition/structuredefinition-wg",
"valueCode" : "cg"
}
],
"url" : "http://hl7.org/fhir/uv/genomics-reporting/CodeSystem/clinvar-evidence-level-custom-cs",
"version" : "3.0.1-SNAPSHOT",
"name" : "ClinVarEvidenceLevelCustomCS",
"title" : "ClinVar Evidence Level Example Codes",
"status" : "active",
"experimental" : true,
"date" : "2024-10-29T16:58:35+00:00",
"publisher" : "HL7 International / Clinical Genomics",
"contact" : [
{
"name" : "HL7 International / Clinical Genomics",
"telecom" : [
{
"system" : "url",
"value" : "http://www.hl7.org/Special/committees/clingenomics"
},
{
"system" : "email",
"value" : "cg@lists.HL7.org"
}
]
}
],
"description" : "ClinVar contains examples of evidence level concepts that are not conflated with clinical significance. These can be found on ClinVar https://www.ncbi.nlm.nih.gov/clinvar/docs/review_status/ . These examples are informational only, for copyright information contact the relevant source.",
"jurisdiction" : [
{
"coding" : [
{
"system" : "http://unstats.un.org/unsd/methods/m49/m49.htm",
"code" : "001",
"display" : "World"
}
]
}
],
"caseSensitive" : true,
"content" : "complete",
"count" : 5,
"concept" : [
{
"code" : "4-star",
"display" : "4 star",
"definition" : "Supported by practice guideline"
},
{
"code" : "3-star",
"display" : "3 star",
"definition" : "Supported by expert panel review"
},
{
"code" : "2-star",
"display" : "2 star",
"definition" : "Supported by submission by multiple-submitters with documentation of criteria for assertion"
},
{
"code" : "1-star",
"display" : "1 star",
"definition" : "Single submitter providing interpretation and documentation of criteria for assertion"
},
{
"code" : "no-star",
"display" : "no star",
"definition" : "submitted, no evidence"
}
]
}
XIG built as of ??metadata-date??. Found ??metadata-resources?? resources in ??metadata-packages?? packages.